Class UnifracTaxon

java.lang.Object
edu.msu.cme.rdp.taxatree.Node
edu.msu.cme.rdp.taxatree.Taxon
edu.msu.cme.rdp.multicompare.taxon.MCTaxon
edu.msu.cme.rdp.unifrac.UnifracTaxon

public class UnifracTaxon extends MCTaxon
  • Constructor Details

    • UnifracTaxon

      public UnifracTaxon(int taxid, String name, String rank, float bl)
    • UnifracTaxon

      public UnifracTaxon(int taxid, String name, String rank, float bl, boolean unclassified)
    • UnifracTaxon

      public UnifracTaxon(MCTaxon taxon, float bl)
  • Method Details

    • getBl

      public float getBl()
    • containsSample

      public boolean containsSample(MCSample sample)
    • resetSamples

      public void resetSamples()
    • setSampleCount

      public void setSampleCount(MCSample sample, double count)
    • addSampleCount

      public void addSampleCount(MCSample sample, double count)
    • resetSamples

      public void resetSamples(List<UnifracTreeBuilder.UnifracSample> samplePool)