Class MCTaxon
java.lang.Object
edu.msu.cme.rdp.taxatree.Node
edu.msu.cme.rdp.taxatree.Taxon
edu.msu.cme.rdp.multicompare.taxon.MCTaxon
- Direct Known Subclasses:
UnifracTaxon
public class MCTaxon
extends edu.msu.cme.rdp.taxatree.Taxon
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Field Summary
FieldsModifier and TypeFieldDescriptionstatic final int
Fields inherited from class edu.msu.cme.rdp.taxatree.Taxon
ROOT_TAXON
Fields inherited from class edu.msu.cme.rdp.taxatree.Node
taxid
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Constructor Summary
Constructors -
Method Summary
Modifier and TypeMethodDescriptionvoid
addSequence
(String seqid) double
double
void
void
void
setLineage
(String lineage) Methods inherited from class edu.msu.cme.rdp.taxatree.Taxon
getName, getRank, getTaxid, getUnclassifiedId, isUnclassified
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Field Details
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sampleCountMap
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Count_Array_size
public static final int Count_Array_size- See Also:
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Constructor Details
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MCTaxon
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MCTaxon
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MCTaxon
public MCTaxon(edu.msu.cme.rdp.taxatree.Taxon t)
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Method Details
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addSequence
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getSequences
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setLineage
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getLineage
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getSamples
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getCount
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getCopyCorrectedCount
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incCount
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incCount
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