Package picard.vcf

Class PairedVariantSubContextIterator

java.lang.Object
picard.vcf.PairedVariantSubContextIterator
All Implemented Interfaces:
Iterator<PairedVariantSubContextIterator.VcfTuple>

public class PairedVariantSubContextIterator extends Object implements Iterator<PairedVariantSubContextIterator.VcfTuple>
An iterator that takes a pair of iterators over VariantContexts and iterates over them in tandem. A tuple will be returned with variant contexts for both contexts if present. Otherwise, the missing context at that site will be empty. The contexts will be returned in coordinate order.