Class ReadBaseStratification.MismatchesInReadStratifier

java.lang.Object
picard.sam.SamErrorMetric.ReadBaseStratification.MismatchesInReadStratifier
All Implemented Interfaces:
ReadBaseStratification.RecordAndOffsetStratifier<Integer>
Enclosing class:
ReadBaseStratification

public static class ReadBaseStratification.MismatchesInReadStratifier extends Object implements ReadBaseStratification.RecordAndOffsetStratifier<Integer>
Stratifies according to the overall mismatches (from SAMTag.NM) that the read has against the reference, NOT including the current base.