Package picard.illumina.parser
Class ReadData
java.lang.Object
picard.illumina.parser.ReadData
Data for a single end of a paired-end read, a barcode read, or for the entire read if not paired end.
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Constructor Summary
Constructors -
Method Summary
Modifier and TypeMethodDescriptionbyte[]
getBases()
byte[]
void
setBases
(byte[] bases) void
setQualities
(byte[] qualities) void
setReadType
(ReadType readType)
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Constructor Details
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ReadData
public ReadData() -
ReadData
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Method Details
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getBases
public byte[] getBases()- Returns:
- ASCII byte representation of bases.
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setBases
public void setBases(byte[] bases) -
getQualities
public byte[] getQualities()- Returns:
- Phred-binary scaled qualities. E.g. Q20 is the byte with value==20.
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setQualities
public void setQualities(byte[] qualities) -
getReadType
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setReadType
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