Class AbstractIlluminaPositionFileReader.PositionInfo

java.lang.Object
picard.illumina.parser.readers.AbstractIlluminaPositionFileReader.PositionInfo
Enclosing class:
AbstractIlluminaPositionFileReader

public class AbstractIlluminaPositionFileReader.PositionInfo extends Object
  • Field Summary

    Fields
    Modifier and Type
    Field
    Description
    final int
    The lane, which is determined from the file name
    final int
    The tile, which is determined from the file name
    final float
    The x-position as it occurs in the file being read
    final int
    The QSeq style x-coordinat, an integer = Math.round(xPos*10 + 1000)
    final float
    The y-position as it occurs in the file being read
    final int
    The QSeq style y-coordinates, an integer = Math.round(yPos*10 + 1000)
  • Constructor Summary

    Constructors
    Constructor
    Description
    PositionInfo(float x, float y, int lane, int tile)
     
  • Method Summary

    Modifier and Type
    Method
    Description
    boolean
    equals(Object other)
     

    Methods inherited from class java.lang.Object

    clone, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
  • Field Details

    • xPos

      public final float xPos
      The x-position as it occurs in the file being read
    • yPos

      public final float yPos
      The y-position as it occurs in the file being read
    • lane

      public final int lane
      The lane, which is determined from the file name
    • tile

      public final int tile
      The tile, which is determined from the file name
    • xQseqCoord

      public final int xQseqCoord
      The QSeq style x-coordinat, an integer = Math.round(xPos*10 + 1000)
    • yQseqCoord

      public final int yQseqCoord
      The QSeq style y-coordinates, an integer = Math.round(yPos*10 + 1000)
  • Constructor Details

    • PositionInfo

      public PositionInfo(float x, float y, int lane, int tile)
  • Method Details