Package org.jmol.c

Enum STR

All Implemented Interfaces:
Serializable, Comparable<STR>, java.lang.constant.Constable

public enum STR extends Enum<STR>
  • Enum Constant Details

    • NOT

      public static final STR NOT
    • NONE

      public static final STR NONE
    • TURN

      public static final STR TURN
    • SHEET

      public static final STR SHEET
    • HELIX

      public static final STR HELIX
    • DNA

      public static final STR DNA
    • RNA

      public static final STR RNA
    • CARBOHYDRATE

      public static final STR CARBOHYDRATE
    • HELIX310

      public static final STR HELIX310
    • HELIXALPHA

      public static final STR HELIXALPHA
    • HELIXPI

      public static final STR HELIXPI
    • ANNOTATION

      public static final STR ANNOTATION
  • Field Details

    • id

      private int id
    • color

      private int color
  • Constructor Details

    • STR

      private STR(int id, int color)
  • Method Details

    • values

      public static STR[] values()
      Returns an array containing the constants of this enum type, in the order they are declared.
      Returns:
      an array containing the constants of this enum type, in the order they are declared
    • valueOf

      public static STR valueOf(String name)
      Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)
      Parameters:
      name - the name of the enum constant to be returned.
      Returns:
      the enum constant with the specified name
      Throws:
      IllegalArgumentException - if this enum type has no constant with the specified name
      NullPointerException - if the argument is null
    • getId

      public int getId()
    • getColor

      public int getColor()
    • getProteinStructureType

      public static final STR getProteinStructureType(String name)
      In DRuMS, RasMol, and Chime, quoting from http://www.umass.edu/microbio/rasmol/rascolor.htm The RasMol structure color scheme colors the molecule by protein secondary structure. Structure Decimal RGB Hex RGB Alpha helices red-magenta [255,0,128] FF 00 80 * Beta strands yellow [255,200,0] FF C8 00 * Turns pale blue [96,128,255] 60 80 FF Other white [255,255,255] FF FF FF Values given in the 1994 RasMol 2.5 Quick Reference Card ([240,0,128] and [255,255,0]) are not correct for RasMol 2.6-beta-2a. This correction was made above on Dec 5, 1998.
      Parameters:
      name -
      Returns:
      0-3 or 7-9, but not dna, rna, carbohydrate
    • getBioStructureTypeName

      public String getBioStructureTypeName(boolean isGeneric)
    • isProtein

      private boolean isProtein()