Package jebl.evolution.sequences
package jebl.evolution.sequences
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ClassDescriptionUninstantiable utility class with only static methods.A default implementation of the Sequence interface.A default implementation of the Sequence interface that converts sequence characters to States such that calling getString() will always return uppercase residues with nucleotide U residues converted to TA codon implementation of the Sequence interface.As of 2007-07-30, instances of this class are only constructed for non-ambigous nucleotide triplets - see
Codons
.A set of standard genetic codes.Uninstantiable utility class with only static methods.A biomolecular sequence.A set of sequence objects.Interface for sequences data types.