Uses of Interface
jebl.evolution.graphs.Edge
Packages that use Edge
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Uses of Edge in jebl.evolution.graphs
Methods in jebl.evolution.graphs that return EdgeModifier and TypeMethodDescriptionReturns the Edge that connects these two nodesMethods in jebl.evolution.graphs that return types with arguments of type EdgeModifier and TypeMethodDescriptionGraph.getEdges()
Returns a list of edges connected to this nodeMethods in jebl.evolution.graphs with parameters of type Edge -
Uses of Edge in jebl.evolution.trees
Classes in jebl.evolution.trees that implement EdgeModifier and TypeClassDescriptionclass
Common implementation of Attributable interface used by Nodes.Methods in jebl.evolution.trees that return EdgeModifier and TypeMethodDescriptionReturns the Edge that connects these two nodesReturns the Edge that connects these two nodesReturns the Edge that connects these two nodesReturns the Edge that connects these two nodesCompactRootedTree.getParentEdge
(Node node) MutableRootedTree.getParentEdge
(Node node) RootedSubtree.getParentEdge
(Node node) SimpleRootedTree.getParentEdge
(Node node) Methods in jebl.evolution.trees that return types with arguments of type EdgeModifier and TypeMethodDescriptionCompactRootedTree.getEdges()
FilteredRootedTree.getEdges()
MutableRootedTree.getEdges()
Returns a list of edges connected to this nodeRootedFromUnrooted.getEdges()
Returns a list of edges connected to this nodeRootedSubtree.getEdges()
Returns a list of edges connected to this nodeSimpleRootedTree.getEdges()
Returns a list of edges connected to this nodeSimpleTree.getEdges()
Returns a list of edges connected to this nodeCompactRootedTree.getExternalEdges()
FilteredRootedTree.getExternalEdges()
MutableRootedTree.getExternalEdges()
The set of external edges.RootedFromUnrooted.getExternalEdges()
The set of external edges.RootedSubtree.getExternalEdges()
The set of external edges.SimpleRootedTree.getExternalEdges()
The set of external edges.SimpleTree.getExternalEdges()
The set of external edges.Tree.getExternalEdges()
CompactRootedTree.getInternalEdges()
FilteredRootedTree.getInternalEdges()
MutableRootedTree.getInternalEdges()
The set of internal edges.RootedFromUnrooted.getInternalEdges()
The set of internal edges.RootedSubtree.getInternalEdges()
The set of internal edges.SimpleRootedTree.getInternalEdges()
The set of internal edges.SimpleTree.getInternalEdges()
The set of internal edges.Tree.getInternalEdges()
Methods in jebl.evolution.trees with parameters of type EdgeModifier and TypeMethodDescriptionAdds a new node at the midpoint of the given edgeNode[]
Node[]
Node[]
Returns an array of 2 nodes which are the nodes at either end of the edge.Node[]
Node[]
Returns an array of 2 nodes which are the nodes at either end of the edge.Node[]
Returns an array of 2 nodes which are the nodes at either end of the edge.Node[]
Returns an array of 2 nodes which are the nodes at either end of the edge.static void
get split for branch associated with internal nodeboolean
SimpleTree.isExternal
(Edge edge) void
SimpleTree.setEdgeLength
(Edge edge, double length) Change length of an existing edge.