public class CoverageStatisticsCalculator
extends java.lang.Object
Constructor and Description |
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CoverageStatisticsCalculator()
Initialise a new CoverageStatisticsCalculator object.
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Modifier and Type | Method and Description |
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void |
logCoverageStatsHeader()
Log the coverage statistics header.
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void |
logOverallStats()
Log the overall coverage and error statistics.
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void |
logRegionStats()
Log the region coverage statistics.
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void |
updateRegionStatsFrom1Nucleobase(Nucleobase nucleobase)
Update the region coverage statistics from the coverage statistics for 1
nucleobase in that region.
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public CoverageStatisticsCalculator()
public void logCoverageStatsHeader()
public void updateRegionStatsFrom1Nucleobase(Nucleobase nucleobase)
nucleobase
- - nucleobase from which to update region stats.public void logRegionStats()
public void logOverallStats()