Package picard.util
Class ScatterIntervalsByNs.ScatterIntervalsByNReferenceArgumentCollection
java.lang.Object
picard.util.ScatterIntervalsByNs.ScatterIntervalsByNReferenceArgumentCollection
- All Implemented Interfaces:
ReferenceArgumentCollection
- Enclosing class:
ScatterIntervalsByNs
public static class ScatterIntervalsByNs.ScatterIntervalsByNReferenceArgumentCollection
extends Object
implements ReferenceArgumentCollection
-
Field Summary
Fields -
Constructor Summary
Constructors -
Method Summary
-
Field Details
-
REFERENCE
@Argument(shortName="R", doc="Reference sequence to use. Note: this tool requires that the reference fasta has both an associated index and a dictionary.") public File REFERENCE
-
-
Constructor Details
-
ScatterIntervalsByNReferenceArgumentCollection
public ScatterIntervalsByNReferenceArgumentCollection()
-
-
Method Details
-
getReferenceFile
- Specified by:
getReferenceFile
in interfaceReferenceArgumentCollection
- Returns:
- The reference provided by the user, if any, or the default, if any.
-