Package picard.sam.SamErrorMetric
Class ReadBaseStratification.FlowCellYStratifier
java.lang.Object
picard.sam.SamErrorMetric.ReadBaseStratification.FlowCellYStratifier
- All Implemented Interfaces:
ReadBaseStratification.RecordAndOffsetStratifier<Integer>
- Enclosing class:
ReadBaseStratification
Stratifies base into their read's Y coordinate which is parsed from the read-name.
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Constructor Summary
Constructors -
Method Summary
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Constructor Details
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FlowCellYStratifier
public FlowCellYStratifier()
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Method Details
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stratify
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getSuffix
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stratify
public Integer stratify(htsjdk.samtools.util.SamLocusIterator.RecordAndOffset recordAndOffset, htsjdk.samtools.reference.SamLocusAndReferenceIterator.SAMLocusAndReference locusInfo) - Specified by:
stratify
in interfaceReadBaseStratification.RecordAndOffsetStratifier<Integer>
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