libStatGen Software 1
Loading...
Searching...
No Matches
TestValidate Class Reference
Collaboration diagram for TestValidate:

Static Public Attributes

static const int READ1_POS = 1010
 
static const int READ1_ALIGN_END = 1016
 
static const int READ1_UNCLIP_START = 1010
 
static const int READ1_UNCLIP_END = 1016
 
static const int READ1_ALIGN_LEN = 7
 
static const std::string READ1_CIGAR = "5M2D"
 
static const std::string READ1_SEQ = "CCGAA"
 
static const std::string READ1_QUAL = "6>6+4"
 
static const int READ2_POS = 1011
 
static const int READ6_POS = 1750
 
static const int READ6_ALIGN_END = 1754
 
static const int READ6_UNCLIP_START = 1745
 
static const int READ6_UNCLIP_END = 1754
 
static const int READ6_ALIGN_LEN = 5
 
static const std::string READ6_CIGAR = "3S2H5M"
 
static const std::string READ6_SEQ = "TGCACGTN"
 
static const std::string READ6_QUAL = "453;>>>>"
 
static const int READ7_POS = 1750
 
static const int READ7_ALIGN_END = 1754
 
static const int READ7_UNCLIP_START = 1747
 
static const int READ7_UNCLIP_END = 1758
 
static const int READ7_ALIGN_LEN = 5
 
static const std::string READ7_CIGAR = "3S5M1S3H"
 
static const std::string READ7_SEQ = "TGCACGTNG"
 
static const std::string READ7_QUAL = "453;>>>>5"
 

Detailed Description

Definition at line 36 of file TestValidate.h.

Member Data Documentation

◆ READ1_ALIGN_END

const int TestValidate::READ1_ALIGN_END = 1016
static

Definition at line 40 of file TestValidate.h.

◆ READ1_ALIGN_LEN

const int TestValidate::READ1_ALIGN_LEN = 7
static

Definition at line 43 of file TestValidate.h.

◆ READ1_CIGAR

const std::string TestValidate::READ1_CIGAR = "5M2D"
static

Definition at line 44 of file TestValidate.h.

◆ READ1_POS

const int TestValidate::READ1_POS = 1010
static

Definition at line 39 of file TestValidate.h.

◆ READ1_QUAL

const std::string TestValidate::READ1_QUAL = "6>6+4"
static

Definition at line 46 of file TestValidate.h.

◆ READ1_SEQ

const std::string TestValidate::READ1_SEQ = "CCGAA"
static

Definition at line 45 of file TestValidate.h.

◆ READ1_UNCLIP_END

const int TestValidate::READ1_UNCLIP_END = 1016
static

Definition at line 42 of file TestValidate.h.

◆ READ1_UNCLIP_START

const int TestValidate::READ1_UNCLIP_START = 1010
static

Definition at line 41 of file TestValidate.h.

◆ READ2_POS

const int TestValidate::READ2_POS = 1011
static

Definition at line 48 of file TestValidate.h.

◆ READ6_ALIGN_END

const int TestValidate::READ6_ALIGN_END = 1754
static

Definition at line 51 of file TestValidate.h.

◆ READ6_ALIGN_LEN

const int TestValidate::READ6_ALIGN_LEN = 5
static

Definition at line 54 of file TestValidate.h.

◆ READ6_CIGAR

const std::string TestValidate::READ6_CIGAR = "3S2H5M"
static

Definition at line 55 of file TestValidate.h.

◆ READ6_POS

const int TestValidate::READ6_POS = 1750
static

Definition at line 50 of file TestValidate.h.

◆ READ6_QUAL

const std::string TestValidate::READ6_QUAL = "453;>>>>"
static

Definition at line 57 of file TestValidate.h.

◆ READ6_SEQ

const std::string TestValidate::READ6_SEQ = "TGCACGTN"
static

Definition at line 56 of file TestValidate.h.

◆ READ6_UNCLIP_END

const int TestValidate::READ6_UNCLIP_END = 1754
static

Definition at line 53 of file TestValidate.h.

◆ READ6_UNCLIP_START

const int TestValidate::READ6_UNCLIP_START = 1745
static

Definition at line 52 of file TestValidate.h.

◆ READ7_ALIGN_END

const int TestValidate::READ7_ALIGN_END = 1754
static

Definition at line 60 of file TestValidate.h.

◆ READ7_ALIGN_LEN

const int TestValidate::READ7_ALIGN_LEN = 5
static

Definition at line 63 of file TestValidate.h.

◆ READ7_CIGAR

const std::string TestValidate::READ7_CIGAR = "3S5M1S3H"
static

Definition at line 64 of file TestValidate.h.

◆ READ7_POS

const int TestValidate::READ7_POS = 1750
static

Definition at line 59 of file TestValidate.h.

◆ READ7_QUAL

const std::string TestValidate::READ7_QUAL = "453;>>>>5"
static

Definition at line 66 of file TestValidate.h.

◆ READ7_SEQ

const std::string TestValidate::READ7_SEQ = "TGCACGTNG"
static

Definition at line 65 of file TestValidate.h.

◆ READ7_UNCLIP_END

const int TestValidate::READ7_UNCLIP_END = 1758
static

Definition at line 62 of file TestValidate.h.

◆ READ7_UNCLIP_START

const int TestValidate::READ7_UNCLIP_START = 1747
static

Definition at line 61 of file TestValidate.h.


The documentation for this class was generated from the following files: