Here is a list of all variables with links to the classes they belong to:
- i -
- id : pwiz::cv::CV, pwiz::cv::CVTermInfo, pwiz::data::Index::Entry, pwiz::data::ParamGroup, pwiz::data::peakdata::Feature, pwiz::data::peakdata::Peak, pwiz::data::pepxml::AnalysisTimestamp, pwiz::data::Term, pwiz::identdata::id_p< T >, pwiz::identdata::Identifiable, pwiz::identdata::IdentifiableParamContainer, pwiz::identdata::MassTable, pwiz::identdata::software_p, pwiz::msdata::ChromatogramIdentity, pwiz::msdata::DataProcessing, pwiz::msdata::InstrumentConfiguration, pwiz::msdata::MSData, pwiz::msdata::Run, pwiz::msdata::Sample, pwiz::msdata::ScanSettings, pwiz::msdata::Software, pwiz::msdata::SourceFile, pwiz::msdata::SpectrumIdentity, pwiz::msdata::SpectrumInfo, pwiz::proteome::IPIFASTADatabase::Record, pwiz::proteome::Protein, pwiz::proteome::ProteomeData, pwiz::tradata::Compound, pwiz::tradata::Contact, pwiz::tradata::Instrument, pwiz::tradata::Peptide, pwiz::tradata::Protein, pwiz::tradata::Publication, pwiz::tradata::Software, pwiz::tradata::Target, pwiz::tradata::TraData, pwiz::tradata::Transition
- id_ : pwiz::data::diff_impl::HasID< object_type >
- id_score : pwiz::analysis::PepxmlRecordReader::record
- idSet_ : pwiz::analysis::ProteinList_FilterPredicate_IdSet, pwiz::analysis::SpectrumList_FilterPredicate_IdSet
- idx_ : ralab::base::resample::Convert2Dense
- ignoreChromatograms : pwiz::msdata::DiffConfig
- ignoreDataProcessing : pwiz::msdata::DiffConfig
- ignoreExtraBinaryDataArrays : pwiz::msdata::DiffConfig
- ignoreIdentity : pwiz::msdata::DiffConfig
- ignoreMetadata : pwiz::msdata::DiffConfig, pwiz::proteome::DiffConfig
- ignoreProteinDetectionList : pwiz::identdata::Reader::Config
- ignoreSequenceCollectionAndAnalysisData : pwiz::identdata::Reader::Config
- ignoreSpectra : pwiz::msdata::DiffConfig
- ignoreVersions : pwiz::data::BaseDiffConfig
- ignoreZeroIntensityPoints : pwiz::msdata::Reader::Config
- il : pwiz::util::mru_list< Item, KeyExtractor >
- imaginary : TestDatum
- impl_ : pwiz::analysis::ChromatogramList_Filter, pwiz::analysis::MSDataCache, pwiz::analysis::PeakFamilyDetectorFT, pwiz::analysis::PrecursorMassFilter, pwiz::analysis::PrecursorRecalculatorDefault, pwiz::analysis::ProteinList_DecoyGenerator, pwiz::analysis::ProteinList_DecoyGeneratorPredicate_Shuffled, pwiz::analysis::ProteinList_Filter, pwiz::analysis::RegionAnalyzer, pwiz::analysis::SavitzkyGolaySmoother< T >, pwiz::analysis::SpectrumList_Demux, pwiz::analysis::SpectrumList_Filter, pwiz::analysis::SpectrumList_MZRefiner, pwiz::analysis::SpectrumList_PrecursorRecalculator, pwiz::analysis::SpectrumList_PrecursorRefine, pwiz::analysis::SpectrumList_Sorter, pwiz::chemistry::Formula, pwiz::chemistry::IsotopeCalculator, pwiz::chemistry::IsotopeEnvelopeEstimator, pwiz::chemistry::IsotopeTable, pwiz::data::BinaryIndexStream, pwiz::data::CVTranslator, pwiz::data::FrequencyData, pwiz::data::MemoryIndex, pwiz::frequency::TruncatedLorentzian, pwiz::identdata::Serializer_Text, pwiz::math::Stats, pwiz::minimxml::XMLWriter, pwiz::msdata::BinaryDataEncoder, pwiz::msdata::Index_mzML, pwiz::msdata::LegacyAdapter_Instrument, pwiz::msdata::LegacyAdapter_Software, pwiz::msdata::Serializer_MGF, pwiz::msdata::Serializer_MSn, pwiz::msdata::Serializer_mzML, pwiz::msdata::Serializer_mzXML, pwiz::msdata::SpectrumIterator, pwiz::msdata::SpectrumWorkerThreads, pwiz::proteome::Digestion::const_iterator, pwiz::proteome::Digestion, pwiz::proteome::Fragmentation, pwiz::proteome::IPIFASTADatabase, pwiz::proteome::Modification, pwiz::proteome::ModificationMap, pwiz::proteome::Peptide, pwiz::util::IterationListenerRegistry, pwiz::util::SHA1Calculator
- include : pwiz::identdata::Filter
- indent_ : pwiz::identdata::TextWriter, pwiz::msdata::TextWriter, pwiz::proteome::TextWriter, pwiz::tradata::TextWriter
- indentationStep : pwiz::minimxml::XMLWriter::Config
- independent : pwiz::data::pepxml::SampleEnzyme, pwiz::identdata::Enzymes
- index : pwiz::analysis::PepxmlRecordReader::record, pwiz::data::Index::Entry, pwiz::data::peakdata::Scan, pwiz::data::pepxml::SpectrumQuery, pwiz::identdata::IonType, pwiz::minimxml::SAXParser::Handler::Attributes, pwiz::msdata::ChromatogramIdentity, pwiz::msdata::SpectrumIdentity, pwiz::msdata::SpectrumInfo, pwiz::msdata::SpectrumInfo::PrecursorInfo, pwiz::msdata::SpectrumListCache::CacheEntry, pwiz::proteome::Protein, SimpleAnalyzer, TestSpectrumInfo
- index_end : pwiz::minimxml::SAXParser::Handler::Attributes
- indexApex : pwiz::analysis::RegionAnalyzer::Stats
- indexed : pwiz::msdata::MSDataFile::WriteConfig, pwiz::msdata::Serializer_mzML::Config, pwiz::msdata::Serializer_mzXML::Config, pwiz::proteome::ProteomeDataFile::WriteConfig, pwiz::proteome::Reader_FASTA::Config
- indexList : isoChain, isotopeChain, precursorGroup
- indexMap : pwiz::analysis::SpectrumList_ScanSummer, rtimeMap
- indexPtr : pwiz::proteome::Serializer_FASTA::Config
- indexRange : pwiz::analysis::RegionAnalyzer::Config, pwiz::util::ReaderTestConfig
- indexSet_ : pwiz::analysis::ChromatogramList_FilterPredicate_IndexSet, pwiz::analysis::ProteinList_FilterPredicate_IndexSet, pwiz::analysis::SpectrumList_FilterPredicate_IndexSet
- indicator_ : ralab::base::resample::Bucket1D
- indicatorptr_ : ralab::base::resample::Bucket1D
- indices_ : TestIterationListener, TestIterationListener_WithCancel
- initialStyle : pwiz::minimxml::XMLWriter::Config
- inner_ : pwiz::analysis::ChromatogramListWrapper, pwiz::msdata::SpectrumListWrapper, pwiz::proteome::ProteinListWrapper
- inputActivationTypeArray : TestChargeStateCalculator
- inputChargeStateArray : TestChargeStateCalculator
- inputFile : pwiz::data::pepxml::PeptideProphetSummary
- inputIntensityArray : TestChargeStateCalculator, TestDeisotopeCalculator, TestDeisotoper, TestETDMassFilter, TestMetadataFixer, TestMS2Denoise, TestScanSummerCalculator, TestThresholder
- inputMSDataPtrs_ : pwiz::msdata::MSDataMerger
- inputMZArray : TestChargeStateCalculator, TestDeisotopeCalculator, TestDeisotoper, TestETDMassFilter, TestMetadataFixer, TestMS2Denoise, TestScanSummerCalculator, TestThresholder
- inputPrecursorMZ : TestChargeStateCalculator, TestScanSummerCalculator
- inputs : pwiz::identdata::DataCollection
- inputSpectra : pwiz::identdata::SpectrumIdentification
- inputSpectrumIdentifications : pwiz::identdata::ProteinDetection
- instrumentConfigurationPtr : pwiz::msdata::Scan
- instrumentConfigurationPtrs : pwiz::msdata::MSData
- instrumentModel : pwiz::data::CalibrationParameters
- instrumentPtr : pwiz::tradata::Configuration
- instrumentPtrs : pwiz::tradata::TraData
- integrationWidth_ : ralab::base::ms::PeakPicker< TReal, TIntegrator >
- integrator_ : ralab::base::ms::PeakPicker< TReal, TIntegrator >
- integwith_ : ralab::base::ms::LocalMinPeakArea< TReal >, ralab::base::ms::SimplePeakArea< TReal >
- intensity : Datum, pairData, parentIon, pwiz::analysis::PrecursorRecalculator::PrecursorInfo, pwiz::analysis::SpectrumList_PrecursorRefine::PrecursorInfo, pwiz::data::peakdata::Peak, pwiz::msdata::MZIntensityPair, pwiz::msdata::SpectrumInfo::PrecursorInfo, pwiz::msdata::TimeIntensityPair, pwiz::util::MSIHandler::Record, RawMassDatum, TestSpectrumInfo
- intensityPvalue : scoreChain
- intensityRank : scoreChain
- intensitySumPvalue : scoreChain
- intensitySumRank : scoreChain
- intensitythreshold_ : ralab::base::ms::PeakPicker< TReal, TIntegrator >
- interpretAsScanNumbers : pwiz::analysis::SpectrumBinaryData::Config
- interpretationList : pwiz::tradata::Transition
- intervals_ : pwiz::util::IntegerSet
- inverse_ : pwiz::analysis::SpectrumList_FilterPredicate_ThermoScanFilter
- invR_ : ralab::base::resample::FTMSCompFunctor< TReal >
- ionInjectionTime : pwiz::msdata::SpectrumInfo
- ionMobilities : precursorGroup
- ionMobility : TestScanSummerCalculator
- ionscore : pwiz::analysis::PepxmlRecordReader::record
- isDecoy : pwiz::identdata::PeptideEvidence
- isDynamic : TestModification
- isObsolete : pwiz::cv::CVTermInfo, pwiz::data::Term
- isolationWindow : pwiz::msdata::Precursor, pwiz::msdata::Product
- isolationWindows_ : pwiz::analysis::PrecursorMaskCodec
- isotopeCalculator : pwiz::chemistry::IsotopeEnvelopeEstimator::Config
- isotopeEnvelopeEstimator : pwiz::frequency::PeakDetectorMatchedFilter::Config
- isotopeMaxChargeState : pwiz::frequency::PeakDetectorMatchedFilter::Config
- isotopeMaxNeutronCount : pwiz::frequency::PeakDetectorMatchedFilter::Config
- isotopes : pwiz::chemistry::detail::Element, pwiz::chemistry::Element::Info::Record
- isotopesSize : pwiz::chemistry::detail::Element
- isotopeThresholdFactor : pwiz::frequency::PeakDetectorMatchedFilter::Config
- isRejected : pwiz::data::pepxml::SearchHit
- issue : pwiz::identdata::BibliographicReference
- isZoomScan : pwiz::msdata::SpectrumInfo
- it_ : pwiz::util::IntegerSet::Iterator
- iterationCount : pwiz::frequency::FrequencyEstimatorPhysicalModel::Config, pwiz::util::IterationListener::UpdateMessage
- iterationIndex : pwiz::util::IterationListener::UpdateMessage
- iterationListenerRegistry : pwiz::identdata::Reader::Config, pwiz::msdata::Reader::Config