Class TranslatedSequence

java.lang.Object
jebl.evolution.sequences.FilteredSequence
jebl.evolution.sequences.TranslatedSequence
All Implemented Interfaces:
Comparable, Sequence, Attributable

public class TranslatedSequence extends FilteredSequence
Author:
Andrew Rambaut
  • Constructor Details

    • TranslatedSequence

      public TranslatedSequence(Sequence source, GeneticCode geneticCode)
      Create a TranslatedSequence from a source codon or nucleotide sequence
      Parameters:
      source -
      geneticCode -
    • TranslatedSequence

      public TranslatedSequence(Sequence source, GeneticCode geneticCode, int frame)
      Create a TranslatedSequence from a source codon or nucleotide sequence
      Parameters:
      source -
      geneticCode -
      frame - indexed from 1
  • Method Details