Package jebl.evolution.trees
Class MostProbableTopology
java.lang.Object
jebl.evolution.trees.MostProbableTopology
Given a set of trees determine the most probable trees, i.e. the most frequent topologies.
Set branch lengths / node heights from set conditional on topology.
- Version:
- $Id: MostProbableTopology.java 889 2008-02-27 01:13:21Z matt_kearse $
- Author:
- Joseph Heled
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Constructor Summary
Constructors -
Method Summary
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Constructor Details
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MostProbableTopology
- Parameters:
trees
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Method Details
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get
Get the most probable tree(s)- Parameters:
max
- At most this number of trees (max invalid input: '<'= 0 is ignored)threshold
- (in [01]) return first K topologies whose total frequencey is greater that threshold.- Returns:
- probable trees
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