Uses of Class
org.biojava.nbio.structure.symmetry.core.QuatSymmetryScores
Packages that use QuatSymmetryScores
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Uses of QuatSymmetryScores in org.biojava.nbio.structure.symmetry.core
Methods in org.biojava.nbio.structure.symmetry.core that return QuatSymmetryScoresModifier and TypeMethodDescriptionstatic QuatSymmetryScores
QuatSuperpositionScorer.calcScores
(QuatSymmetrySubunits subunits, javax.vecmath.Matrix4d transformation, List<Integer> permutation) Returns minimum, mean, and maximum RMSD and TM-Score for two superimposed sets of subunits TM score: Yang Zhang and Jeffrey Skolnick, PROTEINS: Structure, Function, and Bioinformatics 57:702–710 (2004)Helix.getScores()
HelixLayers.getScores()
Returns QuatSymmetryScores averaged over all rotations (except the first rotation, which is the unit operation E)QuatSymmetryResults.getScores()
Rotation.getScores()
RotationGroup.getScores()
Returns QuatSymmetryScores averaged over all rotations (except the first rotation, which is the unit operation E)Methods in org.biojava.nbio.structure.symmetry.core with parameters of type QuatSymmetryScoresModifier and TypeMethodDescriptionvoid
Helix.setScores
(QuatSymmetryScores scores) void
Rotation.setScores
(QuatSymmetryScores scores)